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{2023.06}[foss/2022b] biom-format V2.1.15 #380

Merged
merged 1 commit into from
May 27, 2024
Merged

{2023.06}[foss/2022b] biom-format V2.1.15 #380

merged 1 commit into from
May 27, 2024

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TopRichard
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@TopRichard TopRichard commented May 26, 2024 •
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biom-format/2.1.15 is found on Saga

Lic --> New or Revised BSD

4 out of 55 required modules missing:

* pkgconfig/1.5.5-GCCcore-12.2.0-python (pkgconfig-1.5.5-GCCcore-12.2.0-python.eb)
* mpi4py/3.1.4-gompi-2022b (mpi4py-3.1.4-gompi-2022b.eb)
* h5py/3.8.0-foss-2022b (h5py-3.8.0-foss-2022b.eb)
* biom-format/2.1.15-foss-2022b (biom-format-2.1.15-foss-2022b.eb)

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nessi-bot bot commented May 26, 2024

Instance AWS-MC-NESSI is configured to build for:

  • architectures: x86_64/generic, x86_64/intel/skylake_avx512, x86_64/amd/zen2, aarch64/generic
  • repositories: nessi-2023.06-swl-deb11, nessi-2023.06-cl, nessi-2023.06-swl-deb10

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nessi-bot bot commented May 26, 2024

Instance eX3-NESSI is configured to build for:

  • architectures: x86_64/amd/zen2, aarch64/generic
  • repositories: nessi-2023.06-cl, nessi-2023.06-swl-deb11, nessi-2023.06-swl-deb10

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nessi-bot bot commented May 26, 2024

Instance Saga-NESSI is configured to build for:

  • architectures: x86_64/intel/skylake_avx512, x86_64/intel/broadwell, x86_64/generic
  • repositories: nessi-2023.06-cl, nessi-2023.06-swl-deb11, nessi-2023.06-swl-deb10

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nessi-bot bot commented May 26, 2024

Instance Fram-NESSI is configured to build for:

  • architectures: x86_64/generic, x86_64/intel/broadwell
  • repositories: nessi-2023.06-swl-deb10, nessi-2023.06-cl, nessi-2023.06-swl-deb11

@TopRichard
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bot: build inst:AWS-MC-NESSI repo:nessi-2023.06-swl-deb11 arch:x86_64/generic
bot: build inst:AWS-MC-NESSI repo:nessi-2023.06-swl-deb11 arch:zen2
bot: build inst:Saga-NESSI repo:nessi-2023.06-swl-deb11 arch:x86_64/intel/broadwell
bot: build inst:Saga-NESSI repo:nessi-2023.06-swl-deb11 arch:x86_64/intel/skylake
bot: build inst:eX3 repo:nessi-2023.06-swl-deb11 arch:aarch64/generic

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Updates by the bot instance AWS-MC-NESSI (click for details)

  • received bot command build inst:AWS-MC-NESSI repo:nessi-2023.06-swl-deb11 arch:x86_64/generic from TopRichard

    • expanded format: build instance:AWS-MC-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/generic

  • received bot command build inst:AWS-MC-NESSI repo:nessi-2023.06-swl-deb11 arch:zen2 from TopRichard

    • expanded format: build instance:AWS-MC-NESSI repository:nessi-2023.06-swl-deb11 architecture:zen2

  • received bot command build inst:Saga-NESSI repo:nessi-2023.06-swl-deb11 arch:x86_64/intel/broadwell from TopRichard

    • expanded format: build instance:Saga-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/intel/broadwell

  • received bot command build inst:Saga-NESSI repo:nessi-2023.06-swl-deb11 arch:x86_64/intel/skylake from TopRichard

    • expanded format: build instance:Saga-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/intel/skylake

  • received bot command build inst:eX3 repo:nessi-2023.06-swl-deb11 arch:aarch64/generic from TopRichard

    • expanded format: build instance:eX3 repository:nessi-2023.06-swl-deb11 architecture:aarch64/generic

  • handling command build instance:AWS-MC-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/generic resulted in:

  • handling command build instance:AWS-MC-NESSI repository:nessi-2023.06-swl-deb11 architecture:zen2 resulted in:

  • handling command build instance:Saga-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/intel/broadwell resulted in:

    • no jobs were submitted

  • handling command build instance:Saga-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/intel/skylake resulted in:

    • no jobs were submitted

  • handling command build instance:eX3 repository:nessi-2023.06-swl-deb11 architecture:aarch64/generic resulted in:

    • no jobs were submitted

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Updates by the bot instance eX3-NESSI (click for details)

  • received bot command build inst:AWS-MC-NESSI repo:nessi-2023.06-swl-deb11 arch:x86_64/generic from TopRichard

    • expanded format: build instance:AWS-MC-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/generic

  • received bot command build inst:AWS-MC-NESSI repo:nessi-2023.06-swl-deb11 arch:zen2 from TopRichard

    • expanded format: build instance:AWS-MC-NESSI repository:nessi-2023.06-swl-deb11 architecture:zen2

  • received bot command build inst:Saga-NESSI repo:nessi-2023.06-swl-deb11 arch:x86_64/intel/broadwell from TopRichard

    • expanded format: build instance:Saga-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/intel/broadwell

  • received bot command build inst:Saga-NESSI repo:nessi-2023.06-swl-deb11 arch:x86_64/intel/skylake from TopRichard

    • expanded format: build instance:Saga-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/intel/skylake

  • received bot command build inst:eX3 repo:nessi-2023.06-swl-deb11 arch:aarch64/generic from TopRichard

    • expanded format: build instance:eX3 repository:nessi-2023.06-swl-deb11 architecture:aarch64/generic

  • handling command build instance:AWS-MC-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/generic resulted in:

    • no jobs were submitted

  • handling command build instance:AWS-MC-NESSI repository:nessi-2023.06-swl-deb11 architecture:zen2 resulted in:

    • no jobs were submitted

  • handling command build instance:Saga-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/intel/broadwell resulted in:

    • no jobs were submitted

  • handling command build instance:Saga-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/intel/skylake resulted in:

    • no jobs were submitted

  • handling command build instance:eX3 repository:nessi-2023.06-swl-deb11 architecture:aarch64/generic resulted in:

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Updates by the bot instance Saga-NESSI (click for details)

  • received bot command build inst:AWS-MC-NESSI repo:nessi-2023.06-swl-deb11 arch:x86_64/generic from TopRichard

    • expanded format: build instance:AWS-MC-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/generic

  • received bot command build inst:AWS-MC-NESSI repo:nessi-2023.06-swl-deb11 arch:zen2 from TopRichard

    • expanded format: build instance:AWS-MC-NESSI repository:nessi-2023.06-swl-deb11 architecture:zen2

  • received bot command build inst:Saga-NESSI repo:nessi-2023.06-swl-deb11 arch:x86_64/intel/broadwell from TopRichard

    • expanded format: build instance:Saga-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/intel/broadwell

  • received bot command build inst:Saga-NESSI repo:nessi-2023.06-swl-deb11 arch:x86_64/intel/skylake from TopRichard

    • expanded format: build instance:Saga-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/intel/skylake

  • received bot command build inst:eX3 repo:nessi-2023.06-swl-deb11 arch:aarch64/generic from TopRichard

    • expanded format: build instance:eX3 repository:nessi-2023.06-swl-deb11 architecture:aarch64/generic

  • handling command build instance:AWS-MC-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/generic resulted in:

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  • handling command build instance:AWS-MC-NESSI repository:nessi-2023.06-swl-deb11 architecture:zen2 resulted in:

    • no jobs were submitted

  • handling command build instance:Saga-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/intel/broadwell resulted in:

  • handling command build instance:Saga-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/intel/skylake resulted in:

  • handling command build instance:eX3 repository:nessi-2023.06-swl-deb11 architecture:aarch64/generic resulted in:

    • no jobs were submitted

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Updates by the bot instance Fram-NESSI (click for details)

  • received bot command build inst:AWS-MC-NESSI repo:nessi-2023.06-swl-deb11 arch:x86_64/generic from TopRichard

    • expanded format: build instance:AWS-MC-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/generic

  • received bot command build inst:AWS-MC-NESSI repo:nessi-2023.06-swl-deb11 arch:zen2 from TopRichard

    • expanded format: build instance:AWS-MC-NESSI repository:nessi-2023.06-swl-deb11 architecture:zen2

  • received bot command build inst:Saga-NESSI repo:nessi-2023.06-swl-deb11 arch:x86_64/intel/broadwell from TopRichard

    • expanded format: build instance:Saga-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/intel/broadwell

  • received bot command build inst:Saga-NESSI repo:nessi-2023.06-swl-deb11 arch:x86_64/intel/skylake from TopRichard

    • expanded format: build instance:Saga-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/intel/skylake

  • received bot command build inst:eX3 repo:nessi-2023.06-swl-deb11 arch:aarch64/generic from TopRichard

    • expanded format: build instance:eX3 repository:nessi-2023.06-swl-deb11 architecture:aarch64/generic

  • handling command build instance:AWS-MC-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/generic resulted in:

    • no jobs were submitted

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    • no jobs were submitted

  • handling command build instance:Saga-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/intel/broadwell resulted in:

    • no jobs were submitted

  • handling command build instance:Saga-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/intel/skylake resulted in:

    • no jobs were submitted

  • handling command build instance:eX3 repository:nessi-2023.06-swl-deb11 architecture:aarch64/generic resulted in:

    • no jobs were submitted

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New job on instance AWS-MC-NESSI for architecture x86_64-generic for repository nessi-2023.06-swl-deb11 in job dir /project/def-nessi/SHARED/jobs/2024.05/pr_380/11499

date job status comment
May 26 19:39:18 UTC 2024 submitted job id 11499 awaits release by job manager
May 26 19:39:21 UTC 2024 released job awaits launch by Slurm scheduler
May 26 20:19:02 UTC 2024 finished
🤷 UNKNOWN (click triangle for details)
  • Job results file _bot_job11499.result does not exist in job directory, or parsing it failed.
  • No artefacts were found/reported.
May 26 20:19:02 UTC 2024 test result
🤷 UNKNOWN (click triangle for details)
  • Job test file _bot_job11499.test does not exist in job directory, or parsing it failed.

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nessi-bot bot commented May 26, 2024 •
edited by trz42
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New job on instance eX3-NESSI for architecture aarch64-generic for repository nessi-2023.06-swl-deb11 in job dir /home/thomarob/pilot.nessi.no/jobs/2024.05/pr_380/209592

date job status comment
May 26 07:39:21 PM UTC 2024 submitted job id 209592 awaits release by job manager
May 26 07:39:50 PM UTC 2024 released job awaits launch by Slurm scheduler
May 26 07:40:57 PM UTC 2024 running job 209592 is running
May 26 09:06:38 PM UTC 2024 finished
😁 SUCCESS (click triangle for details)
Details
✅ job output file slurm-209592.out
✅ no message matching ERROR:
✅ no message matching FAILED:
✅ no message matching required modules missing:
✅ found message(s) matching No missing installations
✅ found message matching .tar.gz created!
Artefacts
eessi-2023.06-software-linux-aarch64-generic-1716754292.tar.gzsize: 20 MiB (21227747 bytes)
entries: 543
modules under 2023.06/software/linux/aarch64/generic/modules/all
biom-format/2.1.15-foss-2022b.lua
h5py/3.8.0-foss-2022b.lua
mpi4py/3.1.4-gompi-2022b.lua
pkgconfig/1.5.5-GCCcore-12.2.0-python.lua
software under 2023.06/software/linux/aarch64/generic/software
biom-format/2.1.15-foss-2022b
h5py/3.8.0-foss-2022b
mpi4py/3.1.4-gompi-2022b
pkgconfig/1.5.5-GCCcore-12.2.0-python
other under 2023.06/software/linux/aarch64/generic
no other files in tarball
May 26 09:06:38 PM UTC 2024 test result
😁 SUCCESS (click triangle for details)
ReFrame Summary
[ PASSED ] Ran 7/7 test case(s) from 7 check(s) (0 failure(s), 0 skipped, 0 aborted)
Details
✅ job output file slurm-209592.out
✅ no message matching ERROR:
✅ no message matching [\s*FAILED\s*].*Ran .* test case
May 27 04:42:51 PM UTC 2024 uploaded transfer of eessi-2023.06-software-linux-aarch64-generic-1716754292.tar.gz to S3 bucket succeeded
May 27 04:49:09 PM UTC 2024 staged tarball eessi-2023.06-software-linux-aarch64-generic-1716754292.tar.gz downloaded to Stratum-0
May 27 04:49:30 PM UTC 2024 pr_opened merge PR https://github.com/NorESSI/2024-staging/pull/396 to approve ingest
May 27 04:52:40 PM UTC 2024 approved 👍 tarball eessi-2023.06-software-linux-aarch64-generic-1716754292.tar.gz approved, see PR https://github.com/NorESSI/2024-staging/pull/396
May 27 04:54:36 PM UTC 2024 ingested 🎉 tarball eessi-2023.06-software-linux-aarch64-generic-1716754292.tar.gz successfully ingested at 2023.06/software/linux/aarch64/generic/

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edited by trz42
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New job on instance AWS-MC-NESSI for architecture x86_64-amd-zen2 for repository nessi-2023.06-swl-deb11 in job dir /project/def-nessi/SHARED/jobs/2024.05/pr_380/11500

date job status comment
May 26 19:39:22 UTC 2024 submitted job id 11500 awaits release by job manager
May 26 19:40:28 UTC 2024 released job awaits launch by Slurm scheduler
May 26 19:44:52 UTC 2024 running job 11500 is running
May 26 20:26:34 UTC 2024 finished
😁 SUCCESS (click triangle for details)
Details
✅ job output file slurm-11500.out
✅ no message matching ERROR:
✅ no message matching FAILED:
✅ no message matching required modules missing:
✅ found message(s) matching No missing installations
✅ found message matching .tar.gz created!
Artefacts
eessi-2023.06-software-linux-x86_64-amd-zen2-1716753990.tar.gzsize: 20 MiB (21422202 bytes)
entries: 543
modules under 2023.06/software/linux/x86_64/amd/zen2/modules/all
biom-format/2.1.15-foss-2022b.lua
h5py/3.8.0-foss-2022b.lua
mpi4py/3.1.4-gompi-2022b.lua
pkgconfig/1.5.5-GCCcore-12.2.0-python.lua
software under 2023.06/software/linux/x86_64/amd/zen2/software
biom-format/2.1.15-foss-2022b
h5py/3.8.0-foss-2022b
mpi4py/3.1.4-gompi-2022b
pkgconfig/1.5.5-GCCcore-12.2.0-python
other under 2023.06/software/linux/x86_64/amd/zen2
no other files in tarball
May 26 20:26:34 UTC 2024 test result
😁 SUCCESS (click triangle for details)
ReFrame Summary
[ PASSED ] Ran 7/7 test case(s) from 7 check(s) (0 failure(s), 0 skipped, 0 aborted)
Details
✅ job output file slurm-11500.out
✅ no message matching ERROR:
✅ no message matching [\s*FAILED\s*].*Ran .* test case
May 27 16:42:54 UTC 2024 uploaded transfer of eessi-2023.06-software-linux-x86_64-amd-zen2-1716753990.tar.gz to S3 bucket succeeded
May 27 04:49:13 PM UTC 2024 staged tarball eessi-2023.06-software-linux-x86_64-amd-zen2-1716753990.tar.gz downloaded to Stratum-0
May 27 04:49:33 PM UTC 2024 pr_opened merge PR https://github.com/NorESSI/2024-staging/pull/397 to approve ingest
May 27 04:52:44 PM UTC 2024 approved 👍 tarball eessi-2023.06-software-linux-x86_64-amd-zen2-1716753990.tar.gz approved, see PR https://github.com/NorESSI/2024-staging/pull/397
May 27 04:55:48 PM UTC 2024 ingested 🎉 tarball eessi-2023.06-software-linux-x86_64-amd-zen2-1716753990.tar.gz successfully ingested at 2023.06/software/linux/x86_64/amd/zen2/

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edited by trz42
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New job on instance Saga-NESSI for architecture x86_64-intel-broadwell for repository nessi-2023.06-swl-deb11 in job dir /cluster/projects/nn9992k/pilot.nessi.no/jobs/2024.05/pr_380/11664862

date job status comment
May 26 07:39:22 PM UTC 2024 submitted job id 11664862 awaits release by job manager
May 26 07:40:16 PM UTC 2024 released job awaits launch by Slurm scheduler
May 26 07:41:26 PM UTC 2024 running job 11664862 is running
May 26 09:04:37 PM UTC 2024 finished
😁 SUCCESS (click triangle for details)
Details
✅ job output file slurm-11664862.out
✅ no message matching ERROR:
✅ no message matching FAILED:
✅ no message matching required modules missing:
✅ found message(s) matching No missing installations
✅ found message matching .tar.gz created!
Artefacts
eessi-2023.06-software-linux-x86_64-intel-broadwell-1716754129.tar.gzsize: 20 MiB (21443904 bytes)
entries: 543
modules under 2023.06/software/linux/x86_64/intel/broadwell/modules/all
biom-format/2.1.15-foss-2022b.lua
h5py/3.8.0-foss-2022b.lua
mpi4py/3.1.4-gompi-2022b.lua
pkgconfig/1.5.5-GCCcore-12.2.0-python.lua
software under 2023.06/software/linux/x86_64/intel/broadwell/software
biom-format/2.1.15-foss-2022b
h5py/3.8.0-foss-2022b
mpi4py/3.1.4-gompi-2022b
pkgconfig/1.5.5-GCCcore-12.2.0-python
other under 2023.06/software/linux/x86_64/intel/broadwell
no other files in tarball
May 26 09:04:37 PM UTC 2024 test result
😁 SUCCESS (click triangle for details)
ReFrame Summary
[ PASSED ] Ran 7/7 test case(s) from 7 check(s) (0 failure(s), 0 skipped, 0 aborted)
Details
✅ job output file slurm-11664862.out
✅ no message matching ERROR:
✅ no message matching [\s*FAILED\s*].*Ran .* test case
May 27 04:43:22 PM UTC 2024 uploaded transfer of eessi-2023.06-software-linux-x86_64-intel-broadwell-1716754129.tar.gz to S3 bucket succeeded
May 27 04:49:20 PM UTC 2024 staged tarball eessi-2023.06-software-linux-x86_64-intel-broadwell-1716754129.tar.gz downloaded to Stratum-0
May 27 04:49:41 PM UTC 2024 pr_opened merge PR https://github.com/NorESSI/2024-staging/pull/399 to approve ingest
May 27 04:52:52 PM UTC 2024 approved 👍 tarball eessi-2023.06-software-linux-x86_64-intel-broadwell-1716754129.tar.gz approved, see PR https://github.com/NorESSI/2024-staging/pull/399
May 27 04:58:38 PM UTC 2024 ingested 🎉 tarball eessi-2023.06-software-linux-x86_64-intel-broadwell-1716754129.tar.gz successfully ingested at 2023.06/software/linux/x86_64/intel/broadwell/

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edited by trz42
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New job on instance Saga-NESSI for architecture x86_64-intel-skylake_avx512 for repository nessi-2023.06-swl-deb11 in job dir /cluster/projects/nn9992k/pilot.nessi.no/jobs/2024.05/pr_380/11664864

date job status comment
May 26 07:39:27 PM UTC 2024 submitted job id 11664864 awaits release by job manager
May 26 07:40:18 PM UTC 2024 released job awaits launch by Slurm scheduler
May 26 07:41:30 PM UTC 2024 running job 11664864 is running
May 26 08:30:06 PM UTC 2024 finished
😁 SUCCESS (click triangle for details)
Details
✅ job output file slurm-11664864.out
✅ no message matching ERROR:
✅ no message matching FAILED:
✅ no message matching required modules missing:
✅ found message(s) matching No missing installations
✅ found message matching .tar.gz created!
Artefacts
eessi-2023.06-software-linux-x86_64-intel-skylake_avx512-1716753844.tar.gzsize: 20 MiB (21422841 bytes)
entries: 543
modules under 2023.06/software/linux/x86_64/intel/skylake_avx512/modules/all
biom-format/2.1.15-foss-2022b.lua
h5py/3.8.0-foss-2022b.lua
mpi4py/3.1.4-gompi-2022b.lua
pkgconfig/1.5.5-GCCcore-12.2.0-python.lua
software under 2023.06/software/linux/x86_64/intel/skylake_avx512/software
biom-format/2.1.15-foss-2022b
h5py/3.8.0-foss-2022b
mpi4py/3.1.4-gompi-2022b
pkgconfig/1.5.5-GCCcore-12.2.0-python
other under 2023.06/software/linux/x86_64/intel/skylake_avx512
no other files in tarball
May 26 08:30:06 PM UTC 2024 test result
😁 SUCCESS (click triangle for details)
ReFrame Summary
[ PASSED ] Ran 7/7 test case(s) from 7 check(s) (0 failure(s), 0 skipped, 0 aborted)
Details
✅ job output file slurm-11664864.out
✅ no message matching ERROR:
✅ no message matching [\s*FAILED\s*].*Ran .* test case
May 27 04:43:01 PM UTC 2024 uploaded transfer of eessi-2023.06-software-linux-x86_64-intel-skylake_avx512-1716753844.tar.gz to S3 bucket succeeded
May 27 04:49:23 PM UTC 2024 staged tarball eessi-2023.06-software-linux-x86_64-intel-skylake_avx512-1716753844.tar.gz downloaded to Stratum-0
May 27 04:49:45 PM UTC 2024 pr_opened merge PR https://github.com/NorESSI/2024-staging/pull/400 to approve ingest
May 27 04:52:55 PM UTC 2024 approved 👍 tarball eessi-2023.06-software-linux-x86_64-intel-skylake_avx512-1716753844.tar.gz approved, see PR https://github.com/NorESSI/2024-staging/pull/400
May 27 04:59:36 PM UTC 2024 ingested 🎉 tarball eessi-2023.06-software-linux-x86_64-intel-skylake_avx512-1716753844.tar.gz successfully ingested at 2023.06/software/linux/x86_64/intel/skylake_avx512/

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bot: build inst:AWS-MC-NESSI repo:nessi-2023.06-swl-deb11 arch:x86_64/generic

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Updates by the bot instance AWS-MC-NESSI (click for details)

  • received bot command build inst:AWS-MC-NESSI repo:nessi-2023.06-swl-deb11 arch:x86_64/generic from TopRichard

    • expanded format: build instance:AWS-MC-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/generic

  • handling command build instance:AWS-MC-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/generic resulted in:

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nessi-bot bot commented May 27, 2024 •
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Updates by the bot instance eX3-NESSI (click for details)

  • received bot command build inst:AWS-MC-NESSI repo:nessi-2023.06-swl-deb11 arch:x86_64/generic from TopRichard

    • expanded format: build instance:AWS-MC-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/generic

  • handling command build instance:AWS-MC-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/generic resulted in:

    • no jobs were submitted

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nessi-bot bot commented May 27, 2024 •
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Updates by the bot instance Saga-NESSI (click for details)

  • received bot command build inst:AWS-MC-NESSI repo:nessi-2023.06-swl-deb11 arch:x86_64/generic from TopRichard

    • expanded format: build instance:AWS-MC-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/generic

  • handling command build instance:AWS-MC-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/generic resulted in:

    • no jobs were submitted

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nessi-bot bot commented May 27, 2024 •
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Updates by the bot instance Fram-NESSI (click for details)

  • received bot command build inst:AWS-MC-NESSI repo:nessi-2023.06-swl-deb11 arch:x86_64/generic from TopRichard

    • expanded format: build instance:AWS-MC-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/generic

  • handling command build instance:AWS-MC-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/generic resulted in:

    • no jobs were submitted

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nessi-bot bot commented May 27, 2024 •
edited by trz42
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New job on instance AWS-MC-NESSI for architecture x86_64-generic for repository nessi-2023.06-swl-deb11 in job dir /project/def-nessi/SHARED/jobs/2024.05/pr_380/11550

date job status comment
May 27 06:00:39 UTC 2024 submitted job id 11550 awaits release by job manager
May 27 06:01:00 UTC 2024 released job awaits launch by Slurm scheduler
May 27 07:08:14 UTC 2024 running job 11550 is running
May 27 07:53:17 UTC 2024 finished
😁 SUCCESS (click triangle for details)
Details
✅ job output file slurm-11550.out
✅ no message matching ERROR:
✅ no message matching FAILED:
✅ no message matching required modules missing:
✅ found message(s) matching No missing installations
✅ found message matching .tar.gz created!
Artefacts
eessi-2023.06-software-linux-x86_64-generic-1716795029.tar.gzsize: 20 MiB (21397887 bytes)
entries: 543
modules under 2023.06/software/linux/x86_64/generic/modules/all
biom-format/2.1.15-foss-2022b.lua
h5py/3.8.0-foss-2022b.lua
mpi4py/3.1.4-gompi-2022b.lua
pkgconfig/1.5.5-GCCcore-12.2.0-python.lua
software under 2023.06/software/linux/x86_64/generic/software
biom-format/2.1.15-foss-2022b
h5py/3.8.0-foss-2022b
mpi4py/3.1.4-gompi-2022b
pkgconfig/1.5.5-GCCcore-12.2.0-python
other under 2023.06/software/linux/x86_64/generic
no other files in tarball
May 27 07:53:17 UTC 2024 test result
😁 SUCCESS (click triangle for details)
ReFrame Summary
[ PASSED ] Ran 7/7 test case(s) from 7 check(s) (0 failure(s), 0 skipped, 0 aborted)
Details
✅ job output file slurm-11550.out
✅ no message matching ERROR:
✅ no message matching [\s*FAILED\s*].*Ran .* test case
May 27 16:43:14 UTC 2024 uploaded transfer of eessi-2023.06-software-linux-x86_64-generic-1716795029.tar.gz to S3 bucket succeeded
May 27 04:49:16 PM UTC 2024 staged tarball eessi-2023.06-software-linux-x86_64-generic-1716795029.tar.gz downloaded to Stratum-0
May 27 04:49:37 PM UTC 2024 pr_opened merge PR https://github.com/NorESSI/2024-staging/pull/398 to approve ingest
May 27 04:52:48 PM UTC 2024 approved 👍 tarball eessi-2023.06-software-linux-x86_64-generic-1716795029.tar.gz approved, see PR https://github.com/NorESSI/2024-staging/pull/398
May 27 04:56:46 PM UTC 2024 ingested 🎉 tarball eessi-2023.06-software-linux-x86_64-generic-1716795029.tar.gz successfully ingested at 2023.06/software/linux/x86_64/generic/

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Checklist before starting deployment (setting bot:deploy label):

  • Check whether builds for all required architectures succeed (SUCCESS message + reasonably sized tarball)
  • Check if the PR is up-to-date with the target branch nessi.no-2023.06 in the repository (if not what are the differences)
  • Assess if all requested changes are sound (checking files changed on GitHub.com)
  • Verify that all easyconfig/s being built are included with the EB version used (if not why not)
  • Review changes (if any) needed to get the build(s) succeed (common changes for all architectures, changes for a single architecture, changes because of build environment specifics, etc.)

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Target architectures

  • x86_64-intel-broadwell
  • x86_64-intel-skylake_avx512
  • x86_64-amd-zen2
  • x86_64-generic
  • aarch64-generic

Checklist for deployment/ingestion

  • Check if the SPDX license identifier is provided
  • at least one tarball for each architecture has been uploaded
  • at least one tarball for each architecture has been staged
  • for each architecture one and only one tarball has been approved
  • for each architecture one and only one tarball was ingested
  • all tests in the CI for the ingested tarballs have succeeded (rerun failed tests ~ 10 mins after last ingest)
  • has the package become available via CernVM-FS for all architectures ingested (for lmod cache updates pay attention to timestamp of files)
command & log

command

cd /cvmfs/pilot.nessi.no/versions/2023.06/software/linux ; 
ls -l \
      x86_64/{generic,amd/zen2,intel/[bsc]*}/{software,modules/all}/biom-format/2.1.15-foss-2022b* \
      aarch64/generic/{software,modules/all}/biom-format/2.1.15-foss-2022b*

log

-rw-r--r--. 1 cvmfs cvmfs 1713 May 26 20:08 aarch64/generic/modules/all/biom-format/2.1.15-foss-2022b.lua
-rw-rw-r--. 1 cvmfs cvmfs 1713 May 26 20:05 x86_64/amd/zen2/modules/all/biom-format/2.1.15-foss-2022b.lua
-rw-rw-r--. 1 cvmfs cvmfs 1712 May 27 07:29 x86_64/generic/modules/all/biom-format/2.1.15-foss-2022b.lua
-rw-rw-r--. 1 cvmfs cvmfs 1720 May 26 20:06 x86_64/intel/broadwell/modules/all/biom-format/2.1.15-foss-2022b.lua
-rw-rw-r--. 1 cvmfs cvmfs 1725 May 26 20:02 x86_64/intel/skylake_avx512/modules/all/biom-format/2.1.15-foss-2022b.lua

aarch64/generic/software/biom-format/2.1.15-foss-2022b:
total 14
dr-xr-xr-x. 2 cvmfs cvmfs 4096 May 26 20:07 bin
dr-xr-xr-x. 3 cvmfs cvmfs 4096 May 26 20:08 easybuild
dr-xr-xr-x. 3 cvmfs cvmfs 4096 May 26 20:07 lib
lrwxrwxrwx. 1 cvmfs cvmfs    3 May 26 20:07 lib64 -> lib

x86_64/amd/zen2/software/biom-format/2.1.15-foss-2022b:
total 14
dr-xr-xr-x. 2 cvmfs cvmfs 4096 May 26 20:04 bin
dr-xr-xr-x. 3 cvmfs cvmfs 4096 May 26 20:05 easybuild
dr-xr-xr-x. 3 cvmfs cvmfs 4096 May 26 20:04 lib
lrwxrwxrwx. 1 cvmfs cvmfs    3 May 26 20:04 lib64 -> lib

x86_64/generic/software/biom-format/2.1.15-foss-2022b:
total 14
dr-xr-xr-x. 2 cvmfs cvmfs 4096 May 27 07:28 bin
dr-xr-xr-x. 3 cvmfs cvmfs 4096 May 27 07:29 easybuild
dr-xr-xr-x. 3 cvmfs cvmfs 4096 May 27 07:28 lib
lrwxrwxrwx. 1 cvmfs cvmfs    3 May 27 07:28 lib64 -> lib

x86_64/intel/broadwell/software/biom-format/2.1.15-foss-2022b:
total 14
dr-xr-xr-x. 2 cvmfs cvmfs 4096 May 26 20:06 bin
dr-xr-xr-x. 3 cvmfs cvmfs 4096 May 26 20:06 easybuild
dr-xr-xr-x. 3 cvmfs cvmfs 4096 May 26 20:05 lib
lrwxrwxrwx. 1 cvmfs cvmfs    3 May 26 20:06 lib64 -> lib

x86_64/intel/skylake_avx512/software/biom-format/2.1.15-foss-2022b:
total 14
dr-xr-xr-x. 2 cvmfs cvmfs 4096 May 26 20:01 bin
dr-xr-xr-x. 3 cvmfs cvmfs 4096 May 26 20:02 easybuild
dr-xr-xr-x. 3 cvmfs cvmfs 4096 May 26 20:01 lib
lrwxrwxrwx. 1 cvmfs cvmfs    3 May 26 20:01 lib64 -> lib

@TopRichard TopRichard requested a review from justadejavu May 27, 2024 17:17
justadejavu
justadejavu approved these changes May 27, 2024
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Okay

@TopRichard TopRichard merged commit 0136c0e into NorESSI:nessi.no-2023.06 May 27, 2024
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@justadejavu justadejavu justadejavu approved these changes

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